5'-ODMT cEt G Phosphoramidite (Amidite)

SKU:BHB21901340
Overview
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5'-ODMT cEt G Phosphoramidite (Amidite) (CAS 945628-66-0) is a nucleoside/nucleotide analog supplied as a solid. Relevant to Cell Cycle/DNA Damage research. Molecular formula C46H56N7O9P, molecular weight 881.95 g/mol.
Purity 99.88%
CAS Number 945628-66-0
Molecular Weight 881.95 g/mol
Form Solid
Storage -20°C as supplied; in solvent -80°C
Options selector
Catalog no. Size
HY-148504-100MG 100 mg
HY-148504-250MG 250 mg
HY-148504-500MG 500 mg
HY-148504-1G 1 g
Available Options

Select the variant that best fits your experiment. Availability and lead time may vary by option.

  • Options: Size: 100 mg, 250 mg, 500 mg, 1 g
  • Lead time: varies by selected option.
  • Storage: -20°C, stored under nitrogen, away from moisture. In solvent: -80°C, 6 months; -20°C, 1 month (stored under nitrogen, away from moisture).
  • Shipping: Room temperature in continental US; may vary elsewhere.
  • Upon receipt: transfer to -20°C as soon as possible.
Field Specification
CAS no. 945628-66-0
Applications
  • Functional Assay (In Vitro)
Molecular weight 881.95
Molecular formula C46H56N7O9P
Purity 99.88%
SMILES CC(C)N(C(C)C)P(OCCC#N)O[C@@H]([C@](O[C@H]1C)([H])[C@H](N2C3=C(C(N=C(N3)NC(C(C)C)=O)=O)N=C2)O4)[C@@]41COC(C5=CC=C(C=C5)OC)(C6=CC=CC=C6)C7=CC=C(C=C7)OC
Form Solid
Storage -20°C, stored under nitrogen, away from moisture. In solvent: -80°C, 6 months; -20°C, 1 month (stored under nitrogen, away from moisture).
Shipping Room temperature in continental US; may vary elsewhere.
Catalog no. (Mfr.) HY-148504
Main SKU BHB21901340
Nucleoside & Nucleotide Analogs

Compound Overview

5'-ODMT cEt G Phosphoramidite (Amidite) is a potent nucleic acid analog with excellent safety and antisense activity[1][2]. It is supplied as a white to off-white solid (C46H56N7O9P, MW 881.95) at 99.88% purity.

Physical & Chemical Properties

CAS Number 945628-66-0
Molecular Formula C46H56N7O9P
Molecular Weight 881.95 g/mol
Purity 99.88%
Appearance Solid
Color White to off-white
SMILES CC(C)N(C(C)C)P(OCCC#N)O[C@@H]([C@](O[C@H]1C)([H])[C@H](N2C3=C(C(N=C(N3)NC(C(C)C)=O)=O)N=C2)O4)[C@@]41COC(C5=CC=C(C=C5)OC)(C6=CC=CC=C6)C7=CC=C(C=C7)OC
Signaling Pathway Cell Cycle/DNA Damage
Solubility In Vitro: DMSO: 100 mg/mL (113.39 mM; Requires sonication; Hygroscopic DMSO has a significant impact on the solubility of product, please use newly opened DMSO)
Storage -20°C, stored under nitrogen, away from moisture. In solvent: -80°C, 6 months; -20°C, 1 month (stored under nitrogen, away from moisture).
Shipping Room temperature in continental US; may vary elsewhere.

Literature Cited

Sources cited in this description and in the In Vitro & In Vivo Data tab. Peer-reviewed publications that used this product are listed under References.

[1]. Vasquez G, et al. Site-specific incorporation of 5'-methyl DNA enhances the therapeutic profile of gapmer ASOs. Nucleic Acids Res. 2021 Feb 26;49(4):1828-1839.

[2]. Seth PP, et al. Synthesis and biophysical evaluation of 2',4'-constrained 2'O-methoxyethyl and 2',4'-constrained 2'O-ethyl nucleic acid analogues. J Org Chem. 2010 Mar 5;75(5):1569-81.

[3]. Vasquez G, et al., Site-specific incorporation of 5'-methyl DNA enhances the therapeutic profile of gapmer ASOs. Nucleic Acids Res. 2021 Feb 26;49(4):1828-1839.

Safety

For Research Use Only. Not for use in diagnostic or therapeutic procedures, and not for human or veterinary use. Handle in accordance with the Safety Data Sheet and your institution's chemical hygiene plan.

In Vitro

SolventSolubilityNotes
DMSO100 mg/mL (113.39 mM)requires sonication; use freshly opened DMSO (absorbed moisture lowers solubility)

Aliquot the stock solution and store it at -80°C (up to 6 months) or -20°C (up to 1 month); stored under nitrogen, away from moisture; avoid repeated freeze-thaw cycles.

Data provided by the manufacturer.

In Vitro

5'-ODMT cEt G Phosphoramidite Amidite improves RNA-binding ability, influences the construction of antisense oligonucleotides (ASOs) and lowers ASO toxicity, through alteration of nucleotides conformation and 5'-alkyl DNA modification[3].

Data provided by the manufacturer. Numbered citations refer to the Literature Cited list in the product description.

Q.Why is there no price on some sizes?
A.Availability and lead time for those sizes are confirmed on inquiry. Send us the size you need and we will come back with price and lead time.
Q.Can this be used in humans or for diagnostics?
A.No. This product is supplied For Research Use Only. It is not for diagnostic or therapeutic procedures and not for human or veterinary use.

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