DNA Topoisomerase I Assay Kit

SKU:BHT16300061
Overview
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DNA Topoisomerase I Assay Kit, a fluorescence kit that follows topo I DNA relaxation with dye H19, read at Ex 485 nm / Em 535 nm in 96-well or 384-well plates. Sold as the Kit (no enzyme) or the Kit Plus with E. coli topoisomerase I; 100 assays.
Assay Target Topo I DNA relaxation activity
Detection Method Fluorescence
Detection Wavelength Ex 485 nm / Em 535 nm
Plate Format 96-well or 384-well plate
Assay Time About 65 min
Options selector
Catalog no. Format
DRA100K Kit (enzyme not included)
DRA100KE Kit Plus (E. coli Topo I included)
Available Options

Select the variant that best fits your experiment. Availability and lead time may vary by option.

  • Options: Format: Kit (enzyme not included), Kit Plus (E. coli Topo I included)
  • Lead time: options listed in "Availability Content"; other statuses may take longer.
  • Storage: Please contact us to confirm storage conditions.
  • Shipping: Shipped frozen.
  • Upon receipt: store at recommended temperature as soon as possible.
  • Sales terms and conditions: Please review prior to ordering.
Field Specification
Applications
  • Enzyme Activity
Assay type
  • Enzyme Activity Assay
Assay target Topo I DNA relaxation activity
Assay area Antibacterial Drug Discovery
Target type Topoisomerase
Detection method
  • Fluorescence
Detection wavelength Ex 485 nm / Em 535 nm
Instrument required Fluorescence microplate reader
Plate format 96-well or 384-well plate
Assay time
  • About 65 min
Storage Please contact us to confirm storage conditions.
Shipping Shipped frozen.
Catalog no. (Mfr.) DRA100K | DRA100KE
Main SKU BHT16300061
Drug Target Assay Kit

DNA relaxation is the change of supercoiled circular DNA into relaxed DNA, carried out by DNA topoisomerases such as bacterial topoisomerase I.

Formats and Pack Sizes

DRA100K supplies the assay reagents without enzyme, while DRA100KE adds 42 µl of 100 x E. coli topoisomerase I. The H19 dye is also packed differently (8 µl of 4500 x in DRA100K vs 20 µl of 1500 x in DRA100KE).

Kit (enzyme not included), 100 assays (DRA100K) 100 assays
Kit Plus (E. coli Topo I included), 100 assays (DRA100KE) 100 assays (96-well) or 200 assays (384-well)

Kit Components

Component Kit (enzyme not included), 100 assays (DRA100K) Kit Plus (E. coli Topo I included), 100 assays (DRA100KE)
10 x Buffer T1 480 µl 480 µl
10 x Supercoiled plasmid DNA 405 µl 405 µl
Dye H19 (also sold separately as H19 Dye for DNA Relaxation and Supercoiling Assays, BHT16300181) 8 µl (4500 x) 20 µl (1500 x)
10 x H19 dilution buffer 3000 µl 3000 µl
100 x E. coli topoisomerase I Not included 42 µl

Final bacterial topo I reaction: 16 mM Tris-HCl pH 8, 6 mM MgCl2, 25 µg/ml supercoiled plasmid DNA and 40 nM topoisomerase I. Free magnesium is needed for H19 detection, so high EDTA should be avoided in the reaction and detection solutions.

Assay Principle

The kit uses the fluorescence dye H19, which in the presence of magnesium gives a much weaker signal with relaxed DNA than with supercoiled DNA. As topoisomerase I relaxes the supercoiled plasmid, fluorescence at 535 nm (excitation 485 nm) decreases.

Specifications

Assay Target Topo I DNA relaxation activity
Target Type Topoisomerase
Assay Type Enzyme Activity Assay
Detection Method Fluorescence
Detection Wavelength Ex 485 nm / Em 535 nm
Plate Format 96-well or 384-well plate
Instrument Required Fluorescence microplate reader
Assay Time About 65 min (60 min reaction + 5 min detection)
Sizes Kit: 100 assays; Kit Plus: 100 assays (96-well) or 200 assays (384-well)
Storage Please contact us to confirm storage conditions.
Shipping Shipped frozen.

Protocol

The manufacturer's protocol describes the procedure and reaction volumes.

  • E. coli DNA Topoisomerase I Assay (PDF, see Documents): Covers catalog # DRA100KE.

Safety & Handling

For Research Use Only (RUO). Not for use in diagnostic or therapeutic procedures. The DNA Topoisomerase I Assay Kit is shipped frozen. Follow standard laboratory safety practices when handling the reagents. Please contact us to confirm storage conditions.
Q.What does this kit measure?
A.It measures topoisomerase I DNA relaxation activity: the H19 dye signal drops as supercoiled plasmid DNA is converted into relaxed DNA.
Q.What is the difference between the options?
A.DRA100K supplies the assay reagents without enzyme, while DRA100KE adds 42 µl of 100 x E. coli topoisomerase I. The H19 dye is also packed differently (8 µl of 4500 x in DRA100K vs 20 µl of 1500 x in DRA100KE).
Q.Is a protocol available?
A.Yes. The manufacturer's protocol (E. coli DNA Topoisomerase I Assay, linked under Documents) covers catalog # DRA100KE.
Q.How long does the assay take?
A.About 65 min (60 min reaction + 5 min detection). See the protocol for the exact steps.
Q.How should the kit be stored?
A.The DNA Topoisomerase I Assay Kit is shipped frozen. Please contact us for long-term storage conditions.

Can’t find the exact format you need? We can help you source or customize this topo I DNA relaxation activity assay — including larger pack sizes, bulk reagents, bulk enzyme, or a protocol adapted to your samples. Click Talk to a Scientist, email support@biohippo.com, or explore our Research Services. Our team will be in touch shortly.

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Experience the power of Celltrypse™, c-LEcta's innovative enzyme solution for gentle and efficient cell dissociation. Request your free sample and discover a superior alternative for your cell culture workflows.

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