MS645

SKU:BHB21900640
Research Validated
Overview
Click light‑blue chips for details
MS645 (CAS 2250091-96-2) is an inhibitor supplied as a solid. Reported to act on BRD4(BD1BD2). Relevant to Epigenetics research. Molecular formula C48H54Cl2N10O2S2, molecular weight 938.04 g/mol.
Purity 98.0%
CAS Number 2250091-96-2
Molecular Weight 938.04 g/mol
Form Solid
Target BRD4(BD1BD2)
Storage -20°C as supplied; in solvent -80°C
Options selector
Catalog no. Size
HY-125232-5MG 5 mg
HY-125232-10MG 10 mg
HY-125232-25MG 25 mg
HY-125232-50MG 50 mg
HY-125232-100MG 100 mg
HY-125232-200MG 200 mg
HY-125232-500MG 500 mg
HY-125232-1MLX10MM 1 mL x 10 mM (in DMSO)
Available Options

Select the variant that best fits your experiment. Availability and lead time may vary by option.

  • Options: Size: 5 mg, 10 mg, 25 mg, 50 mg, 100 mg, 200 mg, 500 mg, 1 mL x 10 mM (in DMSO)
  • Lead time: varies by selected option.
  • Storage: -20°C, stored under nitrogen. In solvent: -80°C, 6 months; -20°C, 1 month (stored under nitrogen).
  • Shipping: Room temperature in continental US; may vary elsewhere.
  • Upon receipt: transfer to -20°C as soon as possible.
Field Specification
Target BRD4(BD1BD2)
CAS no. 2250091-96-2
Applications
  • Functional Assay (In Vitro)
Molecular weight 938.04
Molecular formula C48H54Cl2N10O2S2
Purity 98.0%
SMILES O=C(NCCCCCCCCCCNC(C[C@H]1C2=NN=C(C)N2C3=C(C(C)=C(C)S3)C(C4=CC=C(Cl)C=C4)=N1)=O)C[C@H]5C6=NN=C(C)N6C7=C(C(C)=C(C)S7)C(C8=CC=C(Cl)C=C8)=N5
Form Solid
Storage -20°C, stored under nitrogen. In solvent: -80°C, 6 months; -20°C, 1 month (stored under nitrogen).
Shipping Room temperature in continental US; may vary elsewhere.
Catalog no. (Mfr.) HY-125232
Main SKU BHB21900640
Inhibitors

Compound Overview

MS645 is a bivalent inhibitor of BET bromodomains (BrD), with a Ki of 18.4 nM for BRD4-BD1/BD2. It spatially constrains bivalent inhibition of BRD4 BrDs, resulting in sustained repression of BRD4 transcriptional activity in solid-tumor cells[1]. It is supplied as a light yellow to yellow solid (C48H54Cl2N10O2S2, MW 938.04) at 98.0% purity.

Physical & Chemical Properties

CAS Number 2250091-96-2
Molecular Formula C48H54Cl2N10O2S2
Molecular Weight 938.04 g/mol
Purity 98.0%
Appearance Solid
Color Light yellow to yellow
SMILES O=C(NCCCCCCCCCCNC(C[C@H]1C2=NN=C(C)N2C3=C(C(C)=C(C)S3)C(C4=CC=C(Cl)C=C4)=N1)=O)C[C@H]5C6=NN=C(C)N6C7=C(C(C)=C(C)S7)C(C8=CC=C(Cl)C=C8)=N5
Target BRD4(BD1BD2)
Signaling Pathway Epigenetics
Solubility In Vitro: DMSO: 200 mg/mL (213.21 mM; Requires sonication; Hygroscopic DMSO has a significant impact on the solubility of product, please use newly opened DMSO)
Storage -20°C, stored under nitrogen. In solvent: -80°C, 6 months; -20°C, 1 month (stored under nitrogen).
Shipping Room temperature in continental US; may vary elsewhere.

Biological Activity

IC50 & Target[1]

BRD4(BD1BD2)

18.4 nM (Ki)

Literature Cited

Sources cited in this description and in the In Vitro & In Vivo Data tab. Peer-reviewed publications that used this product are listed under References.

[1]. Ren C, et al. Spatially constrained tandem bromodomain inhibition bolsters sustained repression of BRD4 transcriptional activity for TNBC cell growth. Proc Natl Acad Sci U S A. 2018 Jul 31;115(31):7949-7954.

Safety

For Research Use Only. Not for use in diagnostic or therapeutic procedures, and not for human or veterinary use. Handle in accordance with the Safety Data Sheet and your institution's chemical hygiene plan.

In Vitro

SolventSolubilityNotes
DMSO200 mg/mL (213.21 mM)requires sonication; use freshly opened DMSO (absorbed moisture lowers solubility)

Aliquot the stock solution and store it at -80°C (up to 6 months) or -20°C (up to 1 month); stored under nitrogen; avoid repeated freeze-thaw cycles.

In Vivo

Choose the formulation that suits the animal model and route of administration; percentages are volume ratios of the final working solution. Start from a clear DMSO stock (see In Vitro above), add the co-solvents one at a time in the order listed, mixing after each addition, and prepare the working solution fresh on the day of dosing. If precipitation or phase separation occurs, gentle warming or sonication can help.

Protocol 1

Composition10% DMSO + 40% PEG300 + 5% Tween-80 + 45% saline
Result≥ 5 mg/mL (5.33 mM); clear solution
How to prepareGives a clear solution at ≥ 5 mg/mL (saturation not determined). For 1 mL of working solution: add 100 μL DMSO stock (50.0 mg/mL) to 400 μL PEG300; then 50 μL Tween-80; then 450 μL saline to bring the volume to 1 mL. Saline: dissolve 0.9 g sodium chloride in ddH2O and make up to 100 mL.

Protocol 2

Composition10% DMSO + 90% Corn Oil
Result≥ 5 mg/mL (5.33 mM); clear solution
How to prepareGives a clear solution at ≥ 5 mg/mL (saturation not determined). Use with caution if continuous dosing will exceed two weeks. For 1 mL of working solution: add 100 μL DMSO stock (50.0 mg/mL) to 900 μL corn oil.

Data provided by the manufacturer.

In Vitro

MS645 inhibits cell growth in the noncancer mouse macrophage RAW cell line and nontumorigenic breast epithelial MCF10A cells, with IC50s of 4.1 nM, 6.8 nM, and 7.9 nM for the triple-negative breast cancer (TNBC) cell lines HS5878T, BT549, and MCF 10A[1]. In HCC1806 cells, MS645 (15, 30, 60 nM) markedly reduces c-Myc expression and increases p21, a tumor suppressor and cell-cycle inhibitor[1].

Data provided by the manufacturer. Numbered citations refer to the Literature Cited list in the product description.

Q.Why is there no price on some sizes?
A.Availability and lead time for those sizes are confirmed on inquiry. Send us the size you need and we will come back with price and lead time.
Q.Can this be used in humans or for diagnostics?
A.No. This product is supplied For Research Use Only. It is not for diagnostic or therapeutic procedures and not for human or veterinary use.

Need this compound in a format that drops straight into your assay? We can tailor formulation, chemistry, and documentation so your results stay consistent across runs and re-orders.

  • Format options: solid or pre-dissolved solution (choose solvent), target concentration, aliquots, light/moisture-protected packaging
  • Chemistry options: free base/acid vs salt forms, hydrate/solvate preference, stereoisomer control (single enantiomer or racemate), close analogs
  • Add-on labels & handles: D/¹³C/¹⁵N isotopes (LC-MS/internal standards), azide/alkyne or other functional handles for conjugation
  • QC & documentation: standard COA or enhanced analytical pack (HPLC/LC-MS/NMR), chiral purity, residual solvents, water content (KF), method-specific specs
  • Scale & continuity: mg to gram scale, bulk pricing, lot reservation, repeat-order continuity

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Regulation of inflammatory responses by pH-dependent transcriptional condensates. Cell 2025 Oct 2;188(20):5632-5652.e25. PMID: 40680734

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